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stan_diag(object, information = c("sample","stepsize", "treedepth","divergence"), chain = 0, ...) stan_par(object, par, chain = 0, ...) stan_rhat(object, pars, ...) stan_ess(object, pars, ...) stan_mcse(object, pars, ...)
par
) or
one or more parameter names (pars
).chain=0
(the default) all chains are combined.
Otherwise the plot for chain
is overlaid on the plot for all chains
combined.stan_diag
and stan_par
, optional arguments to
arrangeGrob
. For stan_rhat
, stan_ess
,
and stan_mcse
, optional arguments to stat_bin
.stan_diag
and stan_par
, a list containing the ggplot objects for
each of the displayed plots. For stan_rhat
, stan_ess
,
and stan_mcse
, a single ggplot object.
List of RStan plotting functions
,
Plot options
## Not run:
# fit <- stan_demo("eight_schools")
#
# stan_diag(fit, info = 'sample') # shows three plots together
# samp_info <- stan_diag(fit, info = 'sample') # saves the three plots in a list
# samp_info[[3]] # access just the third plot
#
# stan_diag(fit, info = 'sample', chain = 1) # overlay chain 1
#
# stan_par(fit, par = "mu")
# ## End(Not run)
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